BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C11SP1|AL424943
(1001 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 1944 0.0
>3x_Contig1736
Length = 21222
Score = 1944 bits (978), Expect = 0.0
Identities = 996/1002 (99%), Gaps = 2/1002 (0%)
Strand = Plus / Minus
Query: 1 aacactttcaaattggagagaatatctaacgccaatatcgcatacttcgacttttgakac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10529 aacactttcaaattggagagaatatctaacgccaatatcgcatacttcgacttttgagac 10470
Query: 61 ctctggccagttgacaccggaagaatttgtgaaggcaggagactatttggttcatatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10469 ctctggccagttgacaccggaagaatttgtgaaggcaggagactatttggttcatatgtt 10410
Query: 121 tccaacgtggaaatggaacggcaacgattttcagaacgtccatcataaagatttcttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10409 tccaacgtggaaatggaacggcaacgattttcagaacgtccatcataaagatttcttacc 10350
Query: 181 gaacgataagcaatttcttgttaccaagaaggtgccttgtaagttacgagccaataacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10349 gaacgataagcaatttcttgttaccaagaaggtgccttgtaagttacgagccaataacta 10290
Query: 241 tcttgaattggatgacacagaaacgaaagatgtcggagacggatgggctttacaggaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10289 tcttgaattggatgacacagaaacgaaagatgtcggagacggatgggctttacaggaaga 10230
Query: 301 acacagccaagatagtgaaaggaagagtacaaacaacgcggacgattctgagttaccgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10229 acacagccaagatagtgaaaggaagagtacaaacaacgcggacgattctgagttaccgga 10170
Query: 361 agagctagaagagttgcatattgtcgacgatggggatgatgaggagtacgatgaccagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10169 agagctagaagagttgcatattgtcgacgatggggatgatgaggagtacgatgaccagtt 10110
Query: 421 gtacgataacgagtttgcagatgatgacatcgtcgatattagaccttccaccttaagatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10109 gtacgataacgagtttgcagatgatgacatcgtcgatattagaccttccaccttaagatt 10050
Query: 481 ctacgacttatatatwacgtactcgacctcgtatcgtgtaccaaagatgtacttatgtgg 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10049 ctacgacttatatataacgtactcgacctcgtatcgtgtaccaaagatgtacttatgtgg 9990
Query: 541 gtatgataatgatggaacgccgctatccccggatcagatgtttgaagatatagcagcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9989 gtatgataatgatggaacgccgctatccccggatcagatgtttgaagatatagcagcaga 9930
Query: 601 ttatcgatccaagacagcaactatcgagccactcccctttttgaaggggaataatatttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9929 ttatcgatccaagacagcaactatcgagccactcccctttttgaaggggaataatatttc 9870
Query: 661 cgctatcaatacatccatgtwagcacgcaaacgtcatgaaggtacttatggagaaagtac 720
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 9869 cg-tatcaatacatccatgtaagcacgcaaacgtcatgaaggtacttatggagaaagtac 9811
Query: 721 ggagttcaagaagccgtgcgaggaaagtcgatccccagacaaccgatgaggactgggaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9810 ggagttcaagaagccgtgcgaggaaagtcgatccccagacaaccgatgaggactgggaag 9751
Query: 781 atttacaatccgatgttgatgatggcttgcgggtcgatcaatacctagtcgtattcctaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9750 atttacaatccgatgttgatgatggcttgcgggtcgatcaatacctagtcgtattcctaa 9691
Query: 841 agttcataaccagtgtaacaccaggcatagaacatgactacaccatggaaggctggtaga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9690 agttcataaccagtgtaacaccaggcatagaacatgactacaccatggaaggctggtaga 9631
Query: 901 atgcatcagtatcgtttgc-aaactgttttaaataccaaattaatttataattcgtaata 959
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 9630 atgcatcagtatcgtttgcaaaactgttttaaataccaaattaatttataattcgtaata 9571
Query: 960 ctgattgtagttttgtgatcmtgtgatcaacttattttttgt 1001
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9570 ctgattgtagttttgtgatcatgtgatcaacttattttttgt 9529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6100
Number of Sequences: 1807
Number of extensions: 6100
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 1001
length of database: 10,358,551
effective HSP length: 16
effective length of query: 985
effective length of database: 10,329,639
effective search space: 10174694415
effective search space used: 10174694415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)